Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791459.1_cds_XP_016507295.1_1970
CDS Infomation

[gene=LOC107824983] [db_xref=GeneID:107824983] [protein=bifunctional endo-1,4-beta-xylanase XylA-like] [protein_id=XP_016507295.1] [location=complement(join(5487..6682,8254..8353))] [gbkey=CDS]
Sequence

ATGGGGAATTGGAACAGAAGATGGATACCAAGAAAAAAGTACAAGTACGAAGATTTTCCC
CCTTCTCCTCCATCCCGTTACAACCAATCTCATTCTCCTGCTATCCAGGAAAATAGTGCT
CCATCATGGGAAATAGATTTCTGCAGAGCAGCCGGGATTCCTTGGCGCAAGGTTGTGAGT
GCAAAAAAATACATGTACTGTTATGATAATGTGGTCAAGTGGGATGACTCTGCAGGTCAA
GAAGCATTCAATGATGCAAAAAGGAGATATTGGGCTGAGATAAGTGGTCTTCCTCCTCAG
AGCCCTCCTCCCGATCCAGATATGTACATTGATAAAGTTGATTGGGACTCAACTATTGAT
CCGGAGCTGATACTAGATTTGGATAGAGAATATTTTAATCCTAATGAAGTTGATAATGCC
GTCAAGTCTGAGAACAACTTAGTTTCTGGATGCACCCTGGTATGGGAGGATAAAGCTGCT
GATAATGGTGAAAATCCTTGGGAAAGTGATAATGTGCAGGGCTCTAAAACTTGTGAGAAT
GTGGAGCAGACTTGGAACGAATGGGATAACCCTTCAAATATCAAAGATGATCCGTGGGAA
AGGAGTTGCCCCAAGACCCAGGAGACGTTGAAGGACTCTACTGCCTGGGGAGGCGGAGGA
AATGAGGAGCAGACTTGGAATGAATGGGATAATCCTGTAAACATCAAAGATGATGATCCG
TGGGAAAGGAGTTGCCCTAAAAACCAGGGGACCTTAAAGGACACAGCTTGGGGAGGCCGT
GGAAATGAGTCGTGGGGTTGGACCACGGGGCTGAATTATGAGAATGGATCTGCTTGTGTT
GATAACACTTTCAGCAATTTGTGGCATCAAGGTGGTGAAAGTGTTGCTGGTGCTAAAGGA
AACGAATGGGTTAATAATAGAACTGGTTCCCGGGGCCGAAACCATTGGAATACCAGGGGG
CATGAGCAGTGGAATTCAGAGTATGGCTCTCGTTGGAATAGGAACCTTAGTCGAGGTGGT
GGAACAACCTCAAATGACAGAAGATGGGGAGAACCTGAGTTCACATCTTGGGATTGGCAG
CGATTACCAAGGCAGAGTAATGAGAGAAATATGGATTTTGGAAGACATAACAGAGGTGAT
AAAACCTTTTATACTGGTTCTCGTAAGAGGGAAGGTTCTTCACAACATATGTCGCGGTAC
AAAAGCTCCAGGTTTCAAGGTGATGAACAGAGGACCGCGTACAATTGGAGAGAAGAAAAA
CCACAGAAGAGGGTTACTTTTAATTTTAATGAATAG

Peptide Sequence

PEP ID

XP_016507295.1
PEP Infomation

PREDICTED: bifunctional endo-1,4-beta-xylanase XylA-like [Nicotiana tabacum]
Sequence

MGNWNRRWIPRKKYKYEDFPPSPPSRYNQSHSPAIQENSAPSWEIDFCRAAGIPWRKVVS
AKKYMYCYDNVVKWDDSAGQEAFNDAKRRYWAEISGLPPQSPPPDPDMYIDKVDWDSTID
PELILDLDREYFNPNEVDNAVKSENNLVSGCTLVWEDKAADNGENPWESDNVQGSKTCEN
VEQTWNEWDNPSNIKDDPWERSCPKTQETLKDSTAWGGGGNEEQTWNEWDNPVNIKDDDP
WERSCPKNQGTLKDTAWGGRGNESWGWTTGLNYENGSACVDNTFSNLWHQGGESVAGAKG
NEWVNNRTGSRGRNHWNTRGHEQWNSEYGSRWNRNLSRGGGTTSNDRRWGEPEFTSWDWQ
RLPRQSNERNMDFGRHNRGDKTFYTGSRKREGSSQHMSRYKSSRFQGDEQRTAYNWREEK
PQKRVTFNFNE

Transcript Sequence

Gene sequence data has not been registered.